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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904450.1_cds_XP_016454612.1_48619
CDS Infomation

[gene=LOC107778815] [db_xref=GeneID:107778815] [protein=probable protein phosphatase 2C 38 isoform X2] [protein_id=XP_016454612.1] [location=complement(join(45152..45364,46625..46861,46984..47351,52191..52530))] [gbkey=CDS]
Sequence

ATGGTGACAACTACATGGAAAAAGTTTGTTTACCCTTGTTGGAAGCCTTCTATAGATAAT
GAAGGTGAAAATAGCAATAGTAGAGGTGGAGACCGAGACCCGGACGGCAGTGTTGATGGA
TTGTGGTGGTATAAAGATTCGGGGCACCATGTTAATGGGGAGTTCTCGATGGCTGTAATT
CAAGCGAATAATACATTGGAGGATCACAGTCAGCTTGAATCGGGGCCGATGAGTTCGGTC
AACACAGGTCTGCAGGGCACCTTTGTGGGAATATATGATGGCCATGCAGGTGCAGAAGCT
GCCCGGTTTATAAATGACCGCCTGTTCAAGAACGTCAAGAAATTCACCTCAGAGGATCAA
GTTATGTCAGCCGACGTTATAAGCAAGGCATATTTGGAAACAGAAGAGGAGTTCCTTTCT
CTAGTGAGAAAGCAATGGCAAACTAAACCCCATATTGCTTCTGCGGGATCATGCTGCTTA
GTGGGTATTATATGCAGTGGGACATTATACATCGCAAATGCTGGAGATTCTCGTGCGGTG
TTAGGAAAACGGGAGAGGGCTATGAAAGAGGTTAAAGCAATTCAATTGTCTTCTGAACAC
AATGCGAGTTTGGCATCTGTCCGTGAGGAACTGCGTTCACTGCATCCTGATGATCCGCAT
GTAGTAGTTTTAAAGCACAAGGTTTGGCGCGTGAAGGGAATTATACAGGTGTCAAGATCA
ATTGGTGATGCATATTTGAAGAGAGCAGAGTTTAACAGAGAGCCTTTGCTCCCTAAATTT
CGATTTCCTGGAACCTTCCGGAAGCCCATTCTCCTAGCTGAGCCATCAATATTTGTACAG
AAGCTCCTTCCAGAAGATCAGTTTCTCATATTTGCTTCTGACGGCTTATGGGAGCATCTA
AGTAATCAAGAGGCCGTGGACATTGTCAGTAGTTGTGAGCACCATGGAATTGCTAGAAAA
CTTGTAAAAGCTGCTCTTCAGGAAGCCGCAAAGAAAAGAGAAATGAGATATGCGGACCTG
AAAAGGATAGATAGAGGAGTGAGGCGACATTTTCATGACGATATCACGGTCATAGTTTTG
TTTCTAGATTCTCATTTGATTAGTCGCAGTTCCTTCCGTGCGCCTGTGGTTTCTATAAAA
GCAAGTGTTGGTCCTTGA

Peptide Sequence

PEP ID

XP_016454612.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 38 isoform X2 [Nicotiana tabacum]
Sequence

MVTTTWKKFVYPCWKPSIDNEGENSNSRGGDRDPDGSVDGLWWYKDSGHHVNGEFSMAVI
QANNTLEDHSQLESGPMSSVNTGLQGTFVGIYDGHAGAEAARFINDRLFKNVKKFTSEDQ
VMSADVISKAYLETEEEFLSLVRKQWQTKPHIASAGSCCLVGIICSGTLYIANAGDSRAV
LGKRERAMKEVKAIQLSSEHNASLASVREELRSLHPDDPHVVVLKHKVWRVKGIIQVSRS
IGDAYLKRAEFNREPLLPKFRFPGTFRKPILLAEPSIFVQKLLPEDQFLIFASDGLWEHL
SNQEAVDIVSSCEHHGIARKLVKAALQEAAKKREMRYADLKRIDRGVRRHFHDDITVIVL
FLDSHLISRSSFRAPVVSIKASVGP

Transcript Sequence

Gene sequence data has not been registered.